FastQCFastQC Report
Sun 21 May 2023
EGAF00007923726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences405419
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39480.9738073449936978No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7930.19560010754306037No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6640.16378117453794716No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6000.1479950372330848No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5910.1457751116745885No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5390.13294887511438785No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)