FastQCFastQC Report
Wed 31 May 2023
EGAF00007924365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509931
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGACGCAGCCATGTAGTCCTGCGGTGCCGCACGACGCT38570.7563768431415231No Hit
GATAACGAAGCTAGCGGAGGTCGGGGTAATGACCACAGAGGACG36790.7214701596882716No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT23640.46359213305329544No Hit
CTGAACAACATCGGTACCCTGAGAAGGCGGTGCGCCCTGAAACA19900.39024887680882314No Hit
GATTGCCGGAGATGGAGTTTCCGGACGCGCCGGAGATTCCCAGG18650.3657357564062589No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC15190.297883439131961No Hit
CTTTGGGTGTTTCTGTTTCTGACGCGCTTCGCTAGAGGTACGTT14700.28827429593415577No Hit
CGGACGCTCCAGTGCGGTGTTGCTAGAGTGGCTCGGGATCGCCG14500.2843521966697455No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT14450.283371671853643No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT13160.25807413159819664No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA12970.2543481372970069No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT12750.25003382810615554No Hit
GAAGATGTAATCCCAGGACTCATCCAGGTCAGCCGGATCGATAG11360.2227752382185041No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG9960.1953205433676321No Hit
CGGCGGCGGTTCCTGATAACCCTGGTACGGGGCTTGCGGAGCCG9460.1855152952066064No Hit
TGGTGCCTGAGACTCGTTCAGTTTCTTAGCTTCGCCCAGGACGT9300.18237761579507816No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA9210.18061267112609353No Hit
GATCGCCGGGGACGGAGTTTCCGGACGAGCAGGGGATTCCCAGG8630.16923858325930372No Hit
CGGTTCGCCGTCCGGGCCACCTTCCTGGTGATATTCAAAGTAAT8400.1647281691052319No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC8340.1635515393259088No Hit
GATGAGCGGGTTGAACGCCTGTTTAACCTTTTTAGGGTGTTTCT8130.159433335098278No Hit
AATCAGCGGGTTGAATGCCTGTTTTACCTTTTTCGGGTGTTTCT8030.15747228546607286No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT7960.15609955072352924No Hit
GTGGGAGTTACGGCATACCGGTGCCGCGTTAGATGGACCCGGGG7820.15335408123844207No Hit
GTGCTGGGAACGTGGGGTCCACGGGCCTGCATAACCCGGGTAGG7560.1482553521947087No Hit
GCGCAGACCCGGGAAACGGTCACGTGCCGCCTGCAGTGCGCGAG7490.1468826174521651No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA7480.1466865124889446No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT7350.14413714796707788No Hit
GCGAGTCTGATCGGTGATAACATAACGAGTTTCGATCATATCTT7330.14374493804063687No Hit
GCCCTGACCGCGCGGGCCGGTGGACGGACCCTCACCCGGGTCGT7260.14237220329809328No Hit
GCGAGAGTCGCTCATCGCTTTGATCATTTCATCACGAGTCTGAA7020.13766568418080094No Hit
GCGCTGTTTAGCCAGCAGTTCCGCTGCTTTACGTTCTTCCTGCT7010.1374695792175804No Hit
TGGCGGCGGTTCCTGGTAGCCCTGATACGGTGCCTGCGGCGCCG6820.13374358491639063No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA6760.13256695513706757No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGTGGA6560.12864485587265728No Hit
AGAGGACGGACGGCTACCCTGTTTGCCGTTCCAGTAGGCCTGTG6520.12786043601977523No Hit
TTTCGGGTGTTTCTGCTTCTGACGGGCTTCGCTGGAGGTACGTT6460.12668380624045214No Hit
GTACTGGGATGCCGGCGGCCAGTCCGGGGAAGAAGTTTTGGCAG6130.12021234245417518No Hit
GCGCACTACAACTTTCTTACCACCCACAACATAAATACCAGCCG5880.11530971837366231No Hit
GATCAGCGGGTTGAATGCCTGTTTAACTTTCTTCGGGTGTTTCT5860.1149175084472213No Hit
GCTCAGCTGAGACGGCTGCATGTTTTTGCCGGCCAGGTGTGCTT5690.11158372407247255No Hit
GTCCTTCAGGGATTCGGAGAACACTTCCTGTGCGCGTTCCGGAT5670.11119151414603153No Hit
CGGGCGTTCCAGAGCGGTGTTAGAGCTGTGAGACGGGATTGCCG5460.10707330991840072No Hit
ACGACGACCGCCGTCGCCCTGACCACGTGGGCCGGTGGACGGAC5320.10432784043331353No Hit
GATTGCCGGGGATGGAGTTTCCGGGCGCGCCGGGGACTCCCAGG5210.10217068583788787No Hit
ACCCTGACCGCGCGGGCCGGTGGACGGGCCTTCGCCCGGGTCAT5190.10177847591144684No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATTGGC5100.1000135312424622No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)