FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007924422

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924422
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences365161
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG52011.4243032525379218No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24080.6594351532611642No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13530.3705214959976558No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7930.21716448361133855No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6830.18704078474974054No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6550.17937293413042465No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5670.15527397504114623No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5210.14267679188084162No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG4940.13528279306935845No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4890.1339135340301949No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4780.1309011641440351No Hit
GCACGTGGTGGTATCCCGCGTCACCTGGTGC4160.1139223520584071No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC3780.10351598336076416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)