FastQCFastQC Report
Wed 31 May 2023
EGAF00007924426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences407165
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT30560.7505556715336534No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19060.4681148919971019No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG13780.3384377340881461No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA13090.321491287315953No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12950.3180528778259428No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC9850.2419166676900028No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT9410.2311102378642565No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7850.19279653211842865No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6460.1586580378961846No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6120.150307614849017No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5600.1375363796004077No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5500.135080372821829No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4850.11911632876106738No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4790.11764272469392016No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC4720.11592351994891506No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG4670.1146955165596257No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4650.11420431520390996No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC4450.10929230164675255No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG4320.10609949283460023No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4110.10094187859958494No Hit

[OK]Adapter Content

Adapter graph