FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences409549
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG54991.3426964783212754No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT9820.23977594866548324No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5340.13038732850037482No Hit
GCCGTCGCGAACAGCAACAACGACACCGCTA4290.10474937064917751No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4180.10206348935048065No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)