FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007924494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559411
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT61741.1036608146782956No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44250.7910105450196724No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT20730.3705683299041313No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC17550.3137228263298362No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC15390.275110786166164No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA12120.2166564475850493No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT9790.17500549685293998No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG6630.11851751216904922No Hit
TCTACCGAAAGCGTTGACAAAAACTTTGTTG6050.10814946434732245No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5710.10207164321044813No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)