FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511039
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43350.8482718540072284No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6600.12914865597341885No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5310.10390596412406881No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)