FastQCFastQC Report
Wed 31 May 2023
EGAF00007924506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences608406
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT73581.2093897824807778No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT20630.339082783535994No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG11660.19164834008869078No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11120.1827726879748063No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6570.10798710071892784No Hit
CAGACCCCGGAACAGAGCACCCCGTCCCGCA6400.10519291394233456No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6340.10420673037412519No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6220.10223436323770639No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)