FastQCFastQC Report
Wed 31 May 2023
EGAF00007924508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences585063
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT70091.1979906437426397No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49610.847942871109607No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT19130.32697333449560134No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG11390.19467988917432824No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6390.10921900718384174No Hit
CAGACCCCGGAACAGAGCACCCCGTCCCGCA6130.10477504132033644No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6060.10357858897246963No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)