FastQCFastQC Report
Wed 31 May 2023
EGAF00007924516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516286
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42230.8179574886787555No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT31390.607996343112151No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC27080.5245154817291191No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG23600.457110981122866No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT16920.3277253305338514No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA15850.3070003835083655No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG14670.2841448344522222No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14460.2800773214846035No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT12800.24792459993104596No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG12500.24211386712016209No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT11910.2306860925920904No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG10080.1952406224456987No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC9930.19233525604025675No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC9550.18497499447980384No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC9060.17548413088869347No Hit
ACTAGCTGTCCGTTCACCCTGCCTCGTGGTG8530.1652185029227986No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA8120.1572771680812573No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC8020.155340257144296No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7980.15456549276951148No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG7790.150885361989285No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC7630.14778630449014693No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7010.1357774566809869No Hit
TCTCGCGTGCCGGCGAAGAAACCGCGTAAAC6950.13461531011881012No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT6450.12493075543400364No Hit
CCGGTAGGCGAAGCAGACTACTTCGAGTATC5310.10284997075264485No Hit
GCCGAAGCTGATTATTTCGAATACCACCAGG5300.10265627965894873No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTC5210.10091305981568355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)