FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007924526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences493298
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42530.8621563436300167No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA38710.7847183649639772No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA16770.3399567806883466No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA13850.28076335196980323No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA6990.14169933792555414No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)