FastQCFastQC Report
Sun 21 May 2023
EGAF00007924569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478036
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT34400.7196110753165034No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC28600.5982813009898836No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA26770.5599996652971743No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA23600.4936866679496942No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA21680.4535223288622614No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA18240.3815612213306111No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT18110.3788417608715662No Hit
GCCCTGACCGCGCGGGCCGGTGGACGGACCCTCACCCGGGTCGT16290.3407693144449372No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGTGGA15630.3269628228836322No Hit
CGGTTCGCCGTCCGGGCCACCTTCCTGGTGATATTCAAAGTAAT14240.29788551489845955No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG13710.28679848379619943No Hit
CTGACCACGGTGTTTACCGAACCAACCACCTTTTTTGCGACGGC13650.28554334819971716No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG12020.2514454978286154No Hit
CGGCGCGGTCTGCAGACGGGATTTTGCAGAGGACGGGCTTTTCG11380.23805738479947117No Hit
TTCCTGGTGGTATTCGAAATAGTCTGCTTCGCCGACCGGGTGGA11220.23471035654218508No Hit
ACCCTGACCGCGCGGGCCGGTGGACGGGCCTTCGCCCGGGTCAT10710.22404170397208578No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG10290.21525575479670986No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT10280.21504656553062948No Hit
GGCAATGCCGGCGCGCCAACGACCATCACGCGCTTTGTCAGTGA10170.21274548360374532No Hit
GTCACCCGGAACGACCTGGCTGGTGTGGCCAGTTTCTGCTGCGG10150.21232710507158456No Hit
ACCACCTTTTTTACGGCGGCCGCCATCACCCTGACCACGTGGAC10120.21169953727334345No Hit
CATGGTGTCACCCGGGACAACCTGGCTGGTGTGACCAGTCTCAG10040.2100260231447004No Hit
ACGACGACCGCCGTCGCCCTGACCACGTGGGCCGGTGGACGGAC9690.20270439883188712No Hit
AGACGCTAGATGAGGAGCGTACGGAGCTGAACACAGATTTAAAT9550.19977574910676182No Hit
CGGTTCGCCATCCGGACCGCCTTCCTGGTGATACTCGAAGTAGT9350.19559196378515423No Hit
CTGGCCACGGTGTTTGCCGAACCAGCCACCTTTTTTACGACGAC8480.1773924976361613No Hit
GTTGCGCGGCGGACGAGTACGTACCGGAACGCGCAGACCGCTCA8100.1694433055251069No Hit
ACCCTCACCGGAACGAGCCGGACGAGAACCTTCACGGTGACGGC8060.16860654846078538No Hit
CTGGCCGCGGTGTTTACCGAACCAGCCGCCTTTTTTACGACGGC7780.16274924901053478No Hit
CAGAGCACGCAGGCCTTCTGCGATGTTTTCGAATTTCGGGTTGG7720.1614941134140525No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG7500.15689194956028416No Hit
GGCAATATTTAAATATGCTCGTCAGGTGGACGGACCTTCGCCCG7380.1543816783673196No Hit
GCGGACGGACATCTGAGACGGGGAACGCGGTGGGTTCGGGGTCC7290.1524989749725962No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT6770.1416211331364165No Hit
TTCAGAAGAACCCAGACGGTCTGCGTTGGAAATGTCGAACACGC6710.14036599753993423No Hit
TGCGTCTTCGAAATCCTCGTCATCGTCATCTTCTTCTTCACGCA6280.13137085909847793No Hit
CAGGAAGTTCTCGATAGAAGATTCGGAGCGGGAGTGGTAGTTAT6220.13011572350199566No Hit
AATAGAGGATTCGGAACGGCTGTGGTAGTTGTGCACGTGACGAG6130.12823302010727228No Hit
GCTAGTTATAGCGGGGCCGAGGTTACTAACCAAAGTGTCGGCAC6030.12614112744646847No Hit
GTGACGACGGCGGCGTTCACCGCCGTCCGGACCTTCGCCTTCAC5880.12300328845526277No Hit
ACCGCCATGAGTACCTTTGCAGCCAATACAAGACGGGCGTTTTT5730.11986544946405711No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCAGTG5700.11923788166581598No Hit
GTCAGACGGACGAGTTGGCAGGGTTGCGCCGGTTTCGTTTGCGG5630.11777355680325331No Hit
GGCGATCAGGTCGGACAGGTTTTTCTTGATAACTTCGCCAGACG5450.11400815001380649No Hit
CTGTGCGCCCTACGCGGAGGTGGCCTATTCATCGGTGCAGGATT5380.11254382515124384No Hit
GGTGGACGGGCCTTCGCCCGGGTCGTCAGCCGGACCCTGCTCGA5290.11066112175652043No Hit
GGTGGACGGACCTTCGCCCGGGTCATCCGCCGGGCCCTGTTCGA5240.10961517542611852No Hit
GCTCAGCTGAGACGGCTGCATGTTTTTGCCGGCCAGGTGTGCTT5040.10543139010451094No Hit
GATGGTGGATTCGCTACGGGAACGGCGCTGCACAACGTGACGGG4940.10333949744370716No Hit
GCGCACTACAACTTTCTTACCACCCACAACATAAATACCAGCCG4880.10208436184722489No Hit
CATGGTATCACCTGGAACAACCTGGCTAGTGTGGCCGGTTTCAG4810.10062003698466224No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)