FastQCFastQC Report
Wed 31 May 2023
EGAF00007924582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491289
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17540.35702000248326343No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG17310.3523384403070291No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16930.3446036854071636No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC16910.3441965930440128No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA12590.2562646426034371No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA11680.23774194008007507No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT9590.19520078813081507No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9010.18339510959944147No Hit
GCCGTCGCGAACAGCAACAACGACACCGCTA8580.17464262379169898No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG8240.16772205361813516No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7740.15754474453936482No Hit
CTGTCCTCCATGGCTATCACCTTCAAACGCG7480.15225254381840425No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG7290.14838516636847152No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC7270.1479780740053207No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6610.13454402602134385No Hit
CTGTCTGCTGAGCAGCTGAACGTCACTGACG6550.13332274893189142No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6420.13067664857141112No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5800.11805678531373591No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC5770.11744614676900969No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5560.11317167695592614No Hit

[OK]Adapter Content

Adapter graph