FastQCFastQC Report
Sun 21 May 2023
EGAF00007924614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences571986
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13590.23759322780627498No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10170.1778015545835038No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9340.16329070991248038No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7680.13426902057043355No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7570.13234589657788826No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7190.1257023773309137No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6730.1176602224529971No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC6420.11224050938309679No Hit
GCGAACGAAGCAGGCCAGGTGGCCGGCGGTG5750.10052693597395741No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)