FastQCFastQC Report
Wed 31 May 2023
EGAF00007924638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences551449
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19850.35996075793047044No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12460.2259501785296555No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9370.1699159849777586No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9040.16393175071493465No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5990.10862291889186489No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5810.10535879111214273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)