FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007924648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559612
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45330.8100255176801069No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18740.3348748775937614No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11180.19978127702765486No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7790.1392035910595198No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7730.13813141962645548No Hit
ATGTCCAACATGGACATCGATGGTATTAACA7590.1356296862826387No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7480.13366403865535406No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT5640.10078411470804771No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)