FastQCFastQC Report
Sun 21 May 2023
EGAF00007924658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences555036
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT55711.0037186777073919No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45260.8154426019213169No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA19780.3563732802917288No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14920.2688113924141857No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG11990.2160220237966546No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10390.187195064824624No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC10090.18179001001736825No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA10010.1803486620687667No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG9740.17548411274223655No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA9370.16881787847995447No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9310.1677368675185033No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT9290.16737653053135293No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9260.16683602505062736No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8910.16053012777549563No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8710.1569267579039918No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8670.15620608392969104No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8480.1527828825517624No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7980.14377445787300283No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7880.1419727729372509No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6520.11746985781102487No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5600.10089435640210724No Hit

[OK]Adapter Content

Adapter graph