FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417647
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA42191.010183240870879No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20300.4860564064868178No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA19030.4556479514997115No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16250.389084561842896No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA15870.3799859690121083No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11280.2700845450823303No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG10780.2581127124102412No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC9650.23105637057131978No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9530.22818313073001842No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8720.20878876180123407No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG8590.2056760853064909No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG8500.20352115542551485No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7860.1881972096052408No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7470.17885918012101126No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG6970.16688734744892217No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG4870.11660565022614791No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4740.11349297373140475No Hit
ATTGAGCAGAAACAGCTGCTGCAGGGTGATG4720.11301410042452119No Hit
CCGAAGAAAAACCGTAAACCGAAGCCACCGA4450.10654931078159308No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4420.10583100082126773No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4260.10200001436619921No Hit

[OK]Adapter Content

Adapter graph