FastQCFastQC Report
Sun 21 May 2023
EGAF00007924786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences505445
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47640.9425357852981037No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33990.6724767284274253No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11530.2281158187339869No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11070.2190149274401765No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8870.17548892560021367No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7410.1466034880155111No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7240.14324011514605942No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG7080.14007458773951667No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7000.1384918240362453No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6910.136711214870065No Hit
CAGGCGCCGTACCCGTCTGAGGACTCCCCGA6580.13018231459407056No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6500.1285995508907992No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5960.11791589589371743No Hit
ATTGCTGCCGTTGGCTCTCCAGTGAAGTCTA5760.11395898663553898No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5630.111386995617723No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5420.10723224089663563No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5330.10545163173045534No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)