FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences505086
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47370.9378600871930721No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC18710.3704319660414266No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG16100.3187575977160325No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10690.2116471254400241No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10560.20907330632803128No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA10380.20550955678834892No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG9030.17878143524073128No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG8200.16234859014108488No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8090.1601707432001679No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7760.1536372023774169No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC7390.1463117172125143No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7230.14314393984390777No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC7140.1413620650740666No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC7080.14017414856083912No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6680.1322547051393228No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG6500.12869095559964047No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG6380.12631512257318556No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6060.1199795678359725No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC5980.11839567915166921No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG5900.11681179046736595No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5890.11661380438182806No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5730.11344602701322151No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5620.11126818007230453No Hit

[OK]Adapter Content

Adapter graph