FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences547451
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG51020.9319555540130533No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21300.3890759172967078No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11500.21006446239024132No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6700.12238538243605364No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5540.10119627144712495No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)