FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences550815
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50910.9242667683341957No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21740.3946878716084348No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11640.2113232210451785No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6690.1214563873532856No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5860.10638780715848334No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)