FastQCFastQC Report
Wed 31 May 2023
EGAF00007924830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467123
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA15210.3256101711968796No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14500.31041074834679516No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9510.20358663563986357No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6740.14428747888671722No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6710.14364524975220658No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6270.13422588911271766No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4700.10061589773999569No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)