FastQCFastQC Report
Sun 21 May 2023
EGAF00007924872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469161
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9900.21101498206372651No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8390.178829868637845No Hit
GGCGTTCAGAAACGCGCAAGCGTTACCGGTT7470.15922039555717546No Hit
CCGAACGGTGGTACCCTGACTAACCTGCTGG7250.1545311737335371No Hit
CTGGGCTGGAAAGCTGGTATCCTGACCGGTT5190.11062300574855967No Hit
CTGGACCAGGTAGCTGAACAGGCGGCTACCA4710.10039197631516686No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)