FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455138
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG8140.17884685523950977No Hit
TTCGCTCTGCAGCGCGTCGGTCTGGTCGGCCAGTGCTTCCAGTG7020.15423893412547404No Hit
CAGAGCGTTACCGAAGCCACGGATGTCGATGCTCGCATCATCGT6650.14610953161458723No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT4700.1032653832464No Hit
ACCGTGCTGGGAGAACAGGCGACCGGCGCTTTTCGGGTTTGCCT4600.10106824743264681No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)