FastQCFastQC Report
Wed 31 May 2023
EGAF00007924876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467043
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42690.9140485993795003No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9550.20447796027346518No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5190.11112467160411355No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT4910.10512950627672397No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4770.10213192361302921No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4690.10041901923377504No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4680.10020490618636829No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)