FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510708
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT14080.2756957008701646No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT13690.26805924324663016No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC12540.2455414835874903No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC12270.24025470523273573No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10900.21342920024749953No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATTGGC9660.18914918113677484No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA8970.17563852534129093No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA8650.16937271395787806No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA8500.16643561487190334No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGTGGA7320.1433304353955685No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA6880.13471494474337586No Hit
GCCCTGACCGCGCGGGCCGGTGGACGGACCCTCACCCGGGTCGT6450.12629526069691488No Hit
AACCCTCTTAACCGCTGTATCGGCGAGAAGCTCTTCTGAGGGGC6020.11787557665045387No Hit
ATACGGATAAGAACTACGGGCAGTGGCTGTAACCCTCTTAACCG5850.11454686435301581No Hit
ACGCTGCTGGATAGCGTCTTTGATGATCTGCGGCAGAATTTTAC5680.11121815205557774No Hit
GGACGCCATAGCACCACCGCCAGTCACACGCGGGGTTTTACGTT5670.1110223454498461No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT5660.11082653884411445No Hit
CTGACCACGGTGTTTACCGAACCAACCACCTTTTTTGCGACGGC5560.10886847278679794No Hit
CGGTTCGCCGTCCGGGCCACCTTCCTGGTGATATTCAAAGTAAT5300.10377750103777503No Hit
TTCCTGGTGGTATTCGAAATAGTCTGCTTCGCCGACCGGGTGGA5120.10025298213460529No Hit

[OK]Adapter Content

Adapter graph