FastQCFastQC Report
Sun 21 May 2023
EGAF00007924902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510400
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9530.18671630094043887No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8980.17594043887147337No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6820.1336206896551724No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6500.12735109717868337No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5370.1052115987460815No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG5340.10462382445141066No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)