FastQCFastQC Report
Wed 31 May 2023
EGAF00007924916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449848
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43490.9667709982038377No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16600.369013533460191No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12900.2867635290142448No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9920.22051893083886112No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8150.18117230709039497No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6160.13693514253703473No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5780.12848784478312675No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5740.1275986555458733No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5390.1198182497199054No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5040.1120378438939375No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)