FastQCFastQC Report
Wed 31 May 2023
EGAF00007924920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458528
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42960.9369111591876613No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14170.30903238188289484No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT10950.2388076627817712No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9810.21394549514969644No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9620.2098018005443506No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9450.2060942843185149No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9250.20173250052341407No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9030.19693453834880312No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8870.19344511131272246No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC8300.18101402749668505No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA6620.14437504361783796No Hit
CCGAAACGTCTGAACCTGTACATCGATGGTG6140.1339067625095959No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5770.12583746248865937No Hit
TCCTACACCAACGGCAAACTGACTATCACCC5740.12518319491939423No Hit
GAAATGGAGAACATCCTGCAGAACCTGACTC5710.12452892735012912No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5310.11580535975992741No Hit
CAGAACCTGACCCTGCGTATCCAGGTTTCTA4980.10860841649801102No Hit
GTGGCAACCAACGAAATGAAGGTTATCAACG4840.10555516784144044No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4810.1049009002721753No Hit
GCCAAACCGGTAGCGGTTCGCTCTCCGGCAC4710.10272000837462489No Hit

[OK]Adapter Content

Adapter graph