FastQCFastQC Report
Sun 21 May 2023
EGAF00007924923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463105
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT15270.32973083857872404No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG11530.24897161550836203No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT9740.21031947398538128No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG9580.20686453396098078No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT8960.19347664136642878No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG8080.17447447123222595No Hit
GTGCGGGTAGATCGGCAGGTTGCCCAGCAGAGTGCCGTCGAAGT7510.16216624739529914No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT7190.1552563673464981No Hit
TTTCACGCATTTCTTGCCGTCCACTACGTAAACGCCGGACGGCA6340.13690199846687037No Hit
GCGCACTACAACTTTCTTACCACCCACAACATAAATACCAGCCG6180.13344705844246985No Hit
ATCGCTAATCTGTACTTTTTTAGCTTCGCGGCCACGAGAACGGG5660.12221850336316818No Hit
TTTAGCTTCACGACCACGAGAACGAGAGCGGGCGCGACGGGTTG5440.11746796082961748No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCAGTG5270.11379708705369193No Hit
GCTCAGCTGAGACGGCTGCATGTTTTTGCCGGCCAGGTGTGCTT5100.11012621327776638No Hit
GTCAGACGGACGAGTTGGCAGGGTTGCGCCGGTTTCGTTTGCGG5090.10991027952624134No Hit
GAACACTACAACTTTTTTGTTGCCGATCAGATAAATACCGGCCG5020.10839874326556613No Hit
GTCCTGATCTTTCTTCGGTGGGATTGCCATGAAGCTCAGGTGCG4640.1001932607076149No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)