FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007924940

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924940
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451776
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17550.3884668508287293No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8800.19478679699674173No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6320.13989233602493273No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5130.1135518487037824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)