FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007924952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494227
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10520.21285765447861005No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10010.20253850963221354No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9510.1924217009592758No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT7480.15134745774714856No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT6840.13839794264578828No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA5040.1019774314232124No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)