FastQCFastQC Report
Sun 21 May 2023
EGAF00007924962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494306
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA15360.310738692227082No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10820.21889275064433772No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8550.17296977985296558No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8220.16629375326214935No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5490.11106480601085157No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)