FastQCFastQC Report
Sun 21 May 2023
EGAF00007924964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495442
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA15340.3096225188821295No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11020.222427650461608No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA9070.183068855688456No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8370.16894005756476035No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5700.1150487847215214No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)