FastQCFastQC Report
Wed 31 May 2023
EGAF00007924966

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924966
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472493
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47571.0067874021414074No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14300.3026499863490041No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8360.17693383817326394No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8090.17121946780163938No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5460.1155572675150743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)