FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007924980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504019
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18120.3595102565577885No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14110.27994976379858694No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9050.1795567230600434No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7490.14860550891930663No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA7210.14305016279148206No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5420.10753562861717514No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)