FastQCFastQC Report
Wed 31 May 2023
EGAF00007924992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007924992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences503146
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41070.8162640664936222No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12250.24346809872283592No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG6100.12123717569055502No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5360.10652971503301228No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)