FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464744
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39870.8578916564818481No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12540.26982596870535175No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11720.2521818463498184No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11580.24916943521594684No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG7760.1669736457060231No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6750.14524125109737834No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5970.12845781763723685No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5960.1282426454133889No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5530.11899023978792626No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5210.11210472862479127No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4710.10134611743239288No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4650.10005508408930508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)