FastQCFastQC Report
Wed 31 May 2023
EGAF00007925028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499706
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14290.2859681492717718No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13720.27456144212797123No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13470.26955850039823415No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12350.24714532144901202No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG8530.17070037181862935No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7360.1472866045234598No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG7110.14228366279372273No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6070.12147142519801643No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5820.11646848346827934No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5730.114667424445574No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5410.10826365903151053No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)