FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925042

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925042
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509067
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23700.4655575788648646No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC14580.28640630801053696No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14000.2750129157851521No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC13680.26872690628149143No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG13590.2669589661085869No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13570.2665660905146081No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG13240.26008364321395805No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG12810.25163681794341414No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG12010.2359217941842626No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11800.23179660044748532No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG11380.22354621297393076No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10040.1972235481773519No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG9700.1905446630797125No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG9540.18740165832788216No Hit
CAGGGTGCCCTGACTCTGAGCCTGCCGAAAC9140.1795441464483064No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9140.1795441464483064No Hit
GCTCTGACCCTGAGCCTGCCGAAACAGCAGG8760.17207951016270942No Hit
GGTTGGGGTCGTCGCTACGAACCAGCACCGA8610.1691329432078685No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7990.15695379979452606No Hit
GCACTGACCCTGAGCCTGCCGAAACAGCAGG7940.15597161080957908No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7590.1490962879149503No Hit
GCGCTGACTCTGTCCCTGCCGAAACAGCAGG7180.14104233823838513No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5750.11295173326890175No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG5240.10293340562244262No Hit

[OK]Adapter Content

Adapter graph