FastQCFastQC Report
Wed 31 May 2023
EGAF00007925044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences484277
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42860.8850306745932596No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23520.48567245605304404No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC13600.28083101200346083No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG12790.2641050473179606No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12730.2628660869708865No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC12720.2626595935797075No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG12660.2614206332326334No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG12370.2554323248884419No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG11000.22714273029691684No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG10860.22425182282041065No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10100.20855832509080546No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8870.18315963797578658No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8800.1817141842375335No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG8740.1804752238904594No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG8720.18006223710810135No Hit
GCTCTGACCCTGAGCCTGCCGAAACAGCAGG8580.17717132963159515No Hit
GGTTGGGGTCGTCGCTACGAACCAGCACCGA8340.1722154882432988No Hit
CAGGGTGCCCTGACTCTGAGCCTGCCGAAAC8150.16829211381089748No Hit
GCACTGACCCTGAGCCTGCCGAAACAGCAGG7630.15755445746958868No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7390.1525986160812923No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7230.1492947218224281No Hit
GCGCTGACTCTGTCCCTGCCGAAACAGCAGG6700.13835057208994025No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5140.10613760306601386No Hit
CCGTCCCAGACTACCGCAGCCGCGCCGAAAC4850.10014929472182243No Hit

[OK]Adapter Content

Adapter graph