FastQCFastQC Report
Wed 31 May 2023
EGAF00007925054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465678
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39070.8389917496639308No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27340.5871009581728146No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT19380.4161673946374963No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC12460.2675668595037773No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12020.2581182705646391No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT9200.1975614050910715No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT9120.19584347982941003No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8470.1818853370784104No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8130.17458415471634905No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7870.16900089761594922No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7060.1516069043416266No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC6940.14903001644913438No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6510.13979616816770388No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5900.126696988047535No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA5720.12283165620879663No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5710.12261691555108896No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5320.11424202990048916No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC4830.10371973767281253No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC4690.10071336846490493No Hit
TCTCGCGTGCCGGCGAAGAAACCGCGTAAAC4690.10071336846490493No Hit

[OK]Adapter Content

Adapter graph