FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433310
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35130.8107359627056842No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8690.2005492603447878No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5760.13293023470494567No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5620.12969929150031156No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4740.10939050564261153No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4620.10662112575292516No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)