FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925076

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925076
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences396417
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32780.8269070196283207No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18590.468950625225457No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA14440.364262884790511No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13730.34635245208959253No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8540.2154297116420335No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7010.17683399046963172No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6060.1528693269965718No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5830.14706735583993624No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5610.14151764429880656No Hit
CGCCTGCTGGAATGCCGTTTTCAGCAGGAAC5150.12991370198553542No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4570.11528264428619357No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4010.10115610581786351No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)