FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences405757
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32680.8054081630138236No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18740.46185278380902856No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA14760.3637645191580182No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14100.3474986260249361No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8430.20775981683618522No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7350.18114290080023265No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5930.14614658527148022No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5890.14516077356644494No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5660.13949235626249207No Hit
CGCCTGCTGGAATGCCGTTTTCAGCAGGAAC5270.12988069213839812No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4670.1150935165628689No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4200.10351022902870437No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)