FastQCFastQC Report
Wed 31 May 2023
EGAF00007925084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences443180
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG37040.835777787806309No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11790.26603186064353085No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8130.18344690644884698No Hit
CGTGTTCGTGGCCACTATCGTGCGCCATGGG5290.1193645922649939No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4440.1001850264001083No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)