FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences452520
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36630.8094669848846461No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11600.25634226111553077No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8690.1920357111287899No Hit
CGTGTTCGTGGCCACTATCGTGCGCCATGGG5160.11402810925483957No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5020.11093432334482453No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)