FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517612
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA25730.49709048476465No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13790.2664157708863009No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10730.20729813064612104No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9440.18237598819192755No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8850.17097748892993206No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7650.14779410060044976No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC7130.13774796565767408No Hit
ATGTCCAACATGGACATCGATGGTATTAACA7030.13581601663021722No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6100.11784889067486842No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5260.1016205188442308No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)