FastQCFastQC Report
Sun 21 May 2023
EGAF00007925156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475661
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21840.4591505294737218No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT21370.44926954280464454No Hit
CCGCACCTGCAGTCTGAAACCGGTCCGCCGCGT10660.22410918700503088No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGCTG10310.216751005442952No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG10170.2138077328181205No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC9880.20771095380954083No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG8930.1877387467124696No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT8870.18647734415897035No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC8380.17617588997205993No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATCCG7490.15746508542848792No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATCCA6900.14506129365241213No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCCCG6700.14085661847408135No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGCCG6180.1299244630104213No Hit
GCCAGCGCACAGGGTACGGCGGACGATACCAAC5060.1063782820117689No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)